Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015928392.1_cds_XP_016475952.1_67838
CDS Infomation

[gene=LOC107797567] [db_xref=GeneID:107797567] [protein=arabinosyltransferase RRA3-like] [protein_id=XP_016475952.1] [location=join(116018..116188,116645..117763)] [gbkey=CDS]
Sequence

ATGGAGGGTCGTAGTGAAAAGTGCGAGCAATGTGTAGGAAGATCAAGAATTGCTGCAGCA
ATAGCAATTGGTGTTGTTGTGGGACGTGTCTTTGCTTTCTTTTATCCCTATGGCTTCTTT
TCTCCTGATCCACAAGCTCAAACTCCGACTCTTTCTAAATATAATGTTTTGGTTGAGTCG
TGGTCATATGAATCCACGGAGTGGATAAACATGTTGAGATCATACATTAGGAAGTTATCG
GAGGAAAATGCAGAGTTGCAGAAGCAGCTAAGAGAGCTAAATGAAAAACTTCAGATTGCC
GAGGAGGGAAAATGTCGTGTGCATGAGCAGCTTGTCGTGTTAACTGAACCTAAAAAAGCT
GGACCATTTGGCAAAGTCAAGAGTATGAGAGCTAACCCGCCTGTCCTTCCTGACGAATCT
GTGAACCCGAGACTAGCTAAGATATTGGCAGAGGTTGCAGTTGAGAATGAGGTCATAGTT
GTACTTGCCAATTCAAATGTGAAATCGATGCTGGAAGTTTGGTTCACCAGTATAAAAAGG
GTGGGTATTCCCAATTATCTGGTCGTCGCACTGGATGATGTGATTGTGGATTTCTGCAAG
GAAAATGCGGTCTCCGTTTACAAAAGAGATCCTGATGAGAGAGTTGATTTTATTGGCAAA
ACTGGAAGTAACCAAGCCGTGTCAGGACTAAAGTTCCGTATTCTGAGAGAGTTCTTGCAG
CTTGGTTACAGTGTCCTGCTTTCTGATGTTGACATTGTGTATCTGCAAAATCCATTTGAT
TATCTATACCGGGATTCAGACGTGGAGGCCATGTCAGATGGGCACAATAACATAACAGCT
TATGGTTACAACGACATTTTTGATGAACCTGACATGGGTTGGGGTCGATACGCTCATACA
ACGAGGATATGGGCTTATAATTCTGGTTTCTTTTATATCCGTCCAACGATTCCTGCAATA
GAGCTCTTGGATCGCGTTACTGATAGGCTTACTGGGGAGCCAAATTCTTGGGACCAGGCT
GTTTTCAATGAAGAGTTAGCCTTTCCATCACATCCTGGATACATTGGACTTTATGCTTCC
AGGAGAACAATGGATTTGTATCTGTTCATGAATAGCAAGGTCCTATTCAAAACTGTAGGA
AAGGATTCGAAACTGAAGAAGTTGAAGCCAGTTGTGGTTCATATAAACTATCATCCGGAT
AAGCTTGACAGAATGAAAGCAGTTGTTGAGTACTATGTTAATGGCAAACATGATGCTCTG
GATGTATTTCCGGATGGTTCTGATTTCTGA

Peptide Sequence

PEP ID

XP_016475952.1
PEP Infomation

PREDICTED: arabinosyltransferase RRA3-like [Nicotiana tabacum]
Sequence

MEGRSEKCEQCVGRSRIAAAIAIGVVVGRVFAFFYPYGFFSPDPQAQTPTLSKYNVLVES
WSYESTEWINMLRSYIRKLSEENAELQKQLRELNEKLQIAEEGKCRVHEQLVVLTEPKKA
GPFGKVKSMRANPPVLPDESVNPRLAKILAEVAVENEVIVVLANSNVKSMLEVWFTSIKR
VGIPNYLVVALDDVIVDFCKENAVSVYKRDPDERVDFIGKTGSNQAVSGLKFRILREFLQ
LGYSVLLSDVDIVYLQNPFDYLYRDSDVEAMSDGHNNITAYGYNDIFDEPDMGWGRYAHT
TRIWAYNSGFFYIRPTIPAIELLDRVTDRLTGEPNSWDQAVFNEELAFPSHPGYIGLYAS
RRTMDLYLFMNSKVLFKTVGKDSKLKKLKPVVVHINYHPDKLDRMKAVVEYYVNGKHDAL
DVFPDGSDF

Transcript Sequence

Gene sequence data has not been registered.